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Add manifest.diagram to nextflow.config - #254

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Aratz merged 1 commit into
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metro-maps
Sep 14, 2026
Merged

Aratz merged 1 commit into
devfrom
metro-maps

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@ewels

@ewels ewels commented Sep 11, 2026

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Adds the new manifest.diagram config attribute, pointing at the pipeline overview diagram.

See nf-core/tools#4460 for background: manifest.diagram gives a canonical location for the metro map, so that downstream consumers can find it. We'll use it for the nf-core website soon, for example. The new config option won't be released until Nextflow 26.10, but older versions ignore unknown manifest fields, so it's safe to set in any pipeline today.

@ewels
ewels requested a review from a team as a code owner September 11, 2026 15:52
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Warning

Newer version of the nf-core template is available.

Your pipeline is using an old version of the nf-core template: 4.0.3.
Please update your pipeline to the latest version.

For more documentation on how to update your pipeline, please see the Synchronisation documentation.

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nf-core pipelines lint overall result: Passed ✅

Posted for pipeline commit 306c4f1

+| ✅ 232 tests passed       |+
#| ❔  12 tests were ignored |#
Details

❔ Tests ignored:

  • files_exist - File is ignored: assets/multiqc_config.yml
  • files_exist - File is ignored: conf/igenomes.config
  • files_exist - File is ignored: conf/igenomes_ignored.config
  • files_exist - File is ignored: tests/default.nf.test
  • files_exist - File is ignored: .github/workflows/linting_comment.yml
  • files_unchanged - File ignored due to lint config: LICENSE or LICENSE.md or LICENCE or LICENCE.md
  • files_unchanged - File ignored due to lint config: .github/PULL_REQUEST_TEMPLATE.md
  • files_unchanged - File ignored due to lint config: .github/workflows/branch.yml
  • files_unchanged - File ignored due to lint config: .github/workflows/linting.yml
  • files_unchanged - File ignored due to lint config: assets/nf-core-pixelator_logo_light.png
  • files_unchanged - File ignored due to lint config: .gitignore or .prettierignore
  • multiqc_config - multiqc_config

✅ Tests passed:

Run details

  • nf-core/tools version 4.0.3
  • Run at 2026-09-11 15:54:09

@Aratz
Aratz merged commit f2af13f into dev Sep 14, 2026
21 checks passed
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2 participants